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DESCRIPTION
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Package: GTestimate
Title: Normalizing scRNA-seq data using using the Good-Turing estimator.
Version: 1.0
Authors@R:
person("Martin", "Fahrenberger", , "martin.fahrenberger@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "https://orcid.org/0000-0003-1107-0197"))
Description: GTestimate is a scRNA-seq normalization method. In contrast to other methods it uses the Simple Good-Turing estimator for the per cell relative gene expression estimation. Thereby GTestimate can account for the unobserved genes and avoid overestimation of the observed genes. At default settings it serves as a drop-in replacement for Seurat's NormalizeData().
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Imports:
Rcpp,
sparseMatrixStats,
rlang,
utils
LinkingTo:
Rcpp
URL: https://github.com/Martin-Fahrenberger/GTestimate
BugReports: https://github.com/Martin-Fahrenberger/GTestimate/issues
Suggests:
testthat (>= 3.0.0)
Config/testthat/edition: 3