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model-output-pull.yml
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name: model-output-pull
run-name: Deploy to ${{ inputs.deploy_target }} by @${{ github.actor }}
on:
push:
branches: ['main']
paths: ['model-output/**']
pull_request:
branches: ['main']
paths: ['model-output/**', '!**README**']
workflow_dispatch:
jobs:
validate-submission:
permissions: write-all
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-r@v2
with:
install-r: false
use-public-rspm: true
- name: Update R
run: |
sudo apt-get update
- uses: r-lib/actions/setup-r-dependencies@v2
with:
packages: Infectious-Disease-Modeling-Hubs/hubValidations, any::sessioninfo
- name: Run validations
env:
PR_NUMBER: ${{ github.event.number }}
run: |
library("hubValidations")
v <- hubValidations::validate_pr(
gh_repo = Sys.getenv("GITHUB_REPOSITORY"),
pr_number = Sys.getenv("PR_NUMBER"),
skip_submit_window_check = FALSE
)
hubValidations::check_for_errors(v, verbose = TRUE)
shell: Rscript {0}