GenePattern Notebook v0.5.6

• Replaced "view code" with "send to code" functionality
• Added "Send to DataFrame" option for GCT files
• Updated loading of client-side resources to new Jupyter standard
• Bug fixes

GenePattern Notebook v0.5.5

• Bug fixes
• Pop out button on JavaScript visualizers
• Embed latest version of modules by default

GenePattern Notebook v0.5.4

• Added ability to specify default GenePattern server
• Fix for markdown #!AUTOEXEC bug
• Updated GenePattern public server URL to HTTPS

GenePattern Notebook v0.5.3

• Minor bug fixes

GenePattern Notebook v0.5.2

• Updated URL of GenePattern public server to HTTPS

GenePattern Notebook v0.5.1

• An early version of the GenePattern Notebook Repository is now available at http://notebook.genepattern.org. This site allows the user to create their own GenePattern notebooks and provides a variety of example notebooks demonstrating GenePattern Notebook's functionality.
• A visual (WYSIWYG) markdown editor may now be installed along with the GenePattern Notebook extension. This editor allows a user to produce visually appealing HTML/markdown without having to write a line of code.
• Switching a cell to the GenePattern cell type will now first warn the user if the cell has any content that may be lost.
• Fixed a couple bugs involving the handling of older or uninstalled modules.

GenePattern Notebook v0.5.0

• The GenePattern Notebook extension has been updated to support Jupyter 4.2 / ipywidgets 5.0.
• As of this release users no longer need to include “%reload_ext genepattern” at the top of their notebooks to load the GenePattern Notebook extension.
• The GenePattern Notebook extension is now available through both the PyPI (PIP) and Anaconda (conda) package managers.
• Fixed a minor bug involving clearing uploaded files from a parameter.

GenePattern Notebook v0.4.8

• Fix to output files sometimes appearing on same line
• Removed unnecessary GP cell warning
• Download option added to output files
• Jobs tagged as coming from the GP Notebook client
• Updated JupyterHub theme
• Added proofs of concept for new widgets

GenePattern Notebook v0.4.7

Fix for issue with JavaScript-based visualizers

GenePattern Notebook v0.4.6

• Bug fixes