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    56 repositories

    • py-pkglite

      Public
      A simple framework for packing source packages written in any programming language into a text file and restoring them into the original directory structure
      clinical-trialspackaging-toolectdpharmaverseretrival-augmented-generation
      Python
      •
      MIT License
      •1•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • sdtm.oak

      Public
      An EDC and Data Standard agnostic SDTM data transformation engine that automates the transformation of raw clinical data in ODM format to SDTM based on standard mapping algorithms
      R
      •
      Apache License 2.0
      •14•32•11•4•Updated Jan 15, 2025Jan 15, 2025

    • admiral

      Public
      ADaM in R Asset Library
      open-sourcerclinical-trialscdisc
      R
      •
      Apache License 2.0
      •68•231•15•3•Updated Jan 15, 2025Jan 15, 2025

    • aNCA

      Public
      Shiny App to perform NCA on (pre-)clinical data
      open-sourcerpharmacokineticsnca
      R
      •
      Apache License 2.0
      •0•15•40•5•Updated Jan 15, 2025Jan 15, 2025

    • admiralvaccine

      Public
      Vaccines extension package for ADaM in R Asset Library (admiral)
      rrstatscdisc
      R
      •
      Apache License 2.0
      •8•6•3•1•Updated Jan 15, 2025Jan 15, 2025

    • admiraldev

      Public
      Development Tools for the admiral family
      R
      •
      Apache License 2.0
      •6•17•15•0•Updated Jan 15, 2025Jan 15, 2025

    • blog

      Public
      Blogging on the latest, greatest and most spectacular stuff happening around the pharmaverse
      R
      •
      Apache License 2.0
      •11•27•15•3•Updated Jan 15, 2025Jan 15, 2025

    • pharmaversesdtm

      Public
      Test SDTM data for use within the pharmaverse family of packages
      R
      •
      Apache License 2.0
      •5•14•8•1•Updated Jan 15, 2025Jan 15, 2025

    • phuse-sde-2024

      Public
      Repository for PHUSE Single Day Event in Basel, September 2024
      R
      •0•1•0•0•Updated Jan 15, 2025Jan 15, 2025

    • examples

      Public
      End to end examples of pharmaverse packages for common safety clinical reporting analyses
      R
      •
      Apache License 2.0
      •9•9•7•0•Updated Jan 15, 2025Jan 15, 2025

    • datacutr

      Public
      Apply a datacut to SDTM in R
      R
      •
      Apache License 2.0
      •2•14•7•0•Updated Jan 15, 2025Jan 15, 2025

    • upptime

      Public
      Monitor pharmaverse.org uptime
      uptime-monitorstatus-pageupptime
      Markdown
      •
      MIT License
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • cardinal

      Public
      FDA Safety Tables and Figures
      R
      •
      Other
      •6•43•22•6•Updated Jan 13, 2025Jan 13, 2025

    • admiralmetabolic

      Public
      Metabolic package extension of admiral
      R
      •
      Apache License 2.0
      •5•7•3•0•Updated Jan 13, 2025Jan 13, 2025

    • admiralonco

      Public
      Oncology extension package for ADaM in R Asset Library (admiral)
      R
      •
      Apache License 2.0
      •8•32•8•2•Updated Jan 10, 2025Jan 10, 2025

    • admiralpeds

      Public
      Admiral Package Extension for Pediatric Clinical Trials
      rstatscdisc
      R
      •
      Apache License 2.0
      •3•13•2•0•Updated Jan 9, 2025Jan 9, 2025

    • admiraltemplate

      Public template
      Recommended Structure for admiral R package extensions
      R
      •
      Apache License 2.0
      •3•3•3•1•Updated Jan 9, 2025Jan 9, 2025

    • pharmaverse

      Public
      Website: https://pharmaverse.org/
      HTML
      •9•33•4•0•Updated Jan 8, 2025Jan 8, 2025

    • pharmaverseadam

      Public
      Test ADaM data for use with pharmaverse
      R
      •
      Apache License 2.0
      •4•14•0•0•Updated Jan 7, 2025Jan 7, 2025

    • logrx

      Public
      Tools to facilitate logging in a clinical environment with the goal of making code easily traceable and reproducible.
      HTML
      •
      Other
      •6•41•34•1•Updated Dec 31, 2024Dec 31, 2024

    • envsetup

      Public
      The purpose of this package is to support the setup of the R environment.
      R
      •
      Apache License 2.0
      •3•7•11•1•Updated Dec 30, 2024Dec 30, 2024

    • sdtmchecks

      Public
      Analysis facing checks for SDTM data
      R
      •
      Apache License 2.0
      •8•21•78•7•Updated Dec 14, 2024Dec 14, 2024

    • admiralci

      Public
      CI/CD workflows used across the admiral family of packages
      actionsclinical-trialscicdr-packageadmiralworkflows
      R
      •
      Other
      •4•13•9•2•Updated Dec 13, 2024Dec 13, 2024

    • admiralophtha

      Public
      Ophthalmology package extension of admiral
      R
      •
      Apache License 2.0
      •3•15•4•0•Updated Dec 10, 2024Dec 10, 2024

    • admiraldiscovery

      Public
      R
      •
      Other
      •4•2•3•0•Updated Dec 4, 2024Dec 4, 2024

    • metatools

      Public
      R
      •
      Other
      •5•10•12•2•Updated Nov 28, 2024Nov 28, 2024

    • pharmaverse.r-universe.dev

      Public
      For the r-universe
      5•3•0•0•Updated Nov 26, 2024Nov 26, 2024

    • roxytractor

      Public
      R package knowledge extractor
      Apache License 2.0
      •0•1•0•0•Updated Oct 30, 2024Oct 30, 2024

    • rinpharma-2024-SDTM-workshop

      Public
      rinpharma conference 2024 SDTM workshop
      R
      •
      Apache License 2.0
      •4•2•0•0•Updated Oct 28, 2024Oct 28, 2024

    • rpharma-2024-ADaM-workshop

      Public
      Repo for the ADaM workshop at R/pharma 2024
      R
      •
      Apache License 2.0
      •6•8•2•0•Updated Oct 25, 2024Oct 25, 2024