| title | layout | filename |
|---|---|---|
Demo of BIOP-desktop |
default |
demo.md |
| Demo | Installation | Build | Run | FAQ |
Please find below different workflows running with BIOP-desktop.
In this demo, we make use of the QuPath OMERO extension to import data from OMERO and use the SAM extension to perform a simple annotation of the dataset.
In this demo, we make use of the ilastik software to segment on RGB images storred locally.
In this demo, we make use of the EMPaNADA software to segment mitochondria of a 3D EM dataset, stored on a S3 bucket (mounted as a biop-desktop hardrive).
