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1. GMATA GMATA Public

   Software GMATA for SSR mining, marker designing, genotyping, plot etc.

   Perl 11 6

2. USAT USAT Public

   Universal STR Allele Toolkit (USAT) for viewing and comparison

   Java 6

3. TRcaller TRcaller Public

   A breakthrough bioinformatics tool TRcaller in Java: the fastest and most accurate STR/SSR/TR genotyping tool

   Shell 2

4. MacroHapCaller MacroHapCaller Public

   A bioinformatics tool in Java to Call and phase STR, SNP and InDel from NGS long read sequencing data

   Shell 1

5. VarSeqStitcher VarSeqStitcher Public

   A novel bioinformatics tool in Java to build phased long alleles of STR+SNP+InDel from VCF file

   HTML 1

6. MacroHapDB MacroHapDB Public

   The macrohap allele database and tools for variant alleles with SNP, STR and InDel from humans

   Python