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| # Hub configuation files | ||
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| This folder should contain configuration files for the Hub, following the recommended [Hub configuration files in our documentation](https://hubdocs.readthedocs.io/en/latest/user-guide/hub-config.html). |
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| { | ||
| "schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.1/admin-schema.json", | ||
| "name": "WNV California Forecasting Challenge 2024", | ||
| "maintainer": "California Department of Public Health", | ||
| "contact": { | ||
| "name": "Héctor M. Sánchez C.", | ||
| "email": "hector.sanchez-castellanos@cdph.ca.gov" | ||
| }, | ||
| "repository_url": "https://github.com/Chipdelmal/WNVCA-2024", | ||
| "file_format": ["csv"], | ||
| "timezone": "US/Pacific" | ||
| } |
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| { | ||
| "$schema": "https://json-schema.org/draft/2020-12/schema", | ||
| "title": "Schema for Modeling Hub model metadata", | ||
| "description": "This is the schema for model metadata files, please refer to https://github.com/cdcepi/FluSight-forecast-hub/blob/main/model-metadata/README.md for more information.", | ||
| "type": "object", | ||
| "properties": { | ||
| "team_name": { | ||
| "description": "The name of the team submitting the model", | ||
| "type": "string" | ||
| }, | ||
| "team_abbr": { | ||
| "description": "Abbreviated name of the team submitting the model", | ||
| "type": "string", | ||
| "pattern": "^[a-zA-Z0-9_+]+$", | ||
| "maxLength": 16 | ||
| }, | ||
| "model_name": { | ||
| "description": "The name of the model", | ||
| "type": "string" | ||
| }, | ||
| "model_abbr": { | ||
| "description": "Abbreviated name of the model", | ||
| "type": "string", | ||
| "pattern": "^[a-zA-Z0-9_+]+$", | ||
| "maxLength": 16 | ||
| }, | ||
| "model_version": { | ||
| "description": "Identifier of the version of the model", | ||
| "type": "string" | ||
| }, | ||
| "model_contributors": { | ||
| "type": "array", | ||
| "items": { | ||
| "type": "object", | ||
| "properties": { | ||
| "name": { | ||
| "type": "string" | ||
| }, | ||
| "affiliation": { | ||
| "type": "string" | ||
| }, | ||
| "email": { | ||
| "type": "string", | ||
| "format": "email" | ||
| }, | ||
| "orcid": { | ||
| "type": "string", | ||
| "pattern": "^\\d{4}\\-\\d{4}\\-\\d{4}\\-[\\dX]{4}$" | ||
| } | ||
| }, | ||
| "additionalProperties": false, | ||
| "required": ["name", "affiliation", "email"] | ||
| } | ||
| }, | ||
| "website_url": { | ||
| "description": "Public facing website for the model", | ||
| "type": "string", | ||
| "format": "uri" | ||
| }, | ||
| "repo_url": { | ||
| "description": "Repository containing code for the model", | ||
| "type": "string", | ||
| "format": "uri" | ||
| }, | ||
| "license": { | ||
| "description": "License for use of model output data", | ||
| "type": "string", | ||
| "enum": [ | ||
| "CC0-1.0", | ||
| "CC-BY-4.0", | ||
| "CC-BY_SA-4.0", | ||
| "PPDL", | ||
| "ODC-by", | ||
| "ODbL", | ||
| "OGL-3.0" | ||
| ] | ||
| }, | ||
| "designated_model": { | ||
| "description": "Team-specified indicator for whether the model should be eligible for inclusion in a Hub ensemble and public visualization. A team may designate up to two models.", | ||
| "type": "boolean" | ||
| }, | ||
| "citation": { | ||
| "description": "One or more citations for this model", | ||
| "type": "string", | ||
| "examples": ["Gibson GC , Reich NG , Sheldon D. Real-time mechanistic bayesian forecasts of Covid-19 mortality. medRxiv. 2020. https://doi.org/10.1101/2020.12.22.20248736"] | ||
| }, | ||
| "team_funding": { | ||
| "description": "Any information about funding source for the team or members of the team.", | ||
| "type": "string", | ||
| "examples": ["National Institutes of General Medical Sciences (R01GM123456). The content is solely the responsibility of the authors and does not necessarily represent the official views of NIGMS."] | ||
| }, | ||
| "data_inputs": { | ||
| "description": "List or description of data inputs used by the model", | ||
| "type": "string" | ||
| }, | ||
| "methods": { | ||
| "description": "A brief (200 char.) description of the methods used by this model", | ||
| "type": "string", | ||
| "maxLength": 200 | ||
| }, | ||
| "methods_long": { | ||
| "description": "A full description of the methods used by this model. Among other details, this should include whether spatial correlation is considered and how the model accounts for uncertainty.", | ||
| "type": "string" | ||
| }, | ||
| "ensemble_of_models": { | ||
| "description": "Indicator for whether this model is an ensemble of any separate component models", | ||
| "type": "boolean" | ||
| }, | ||
| "ensemble_of_hub_models": { | ||
| "description": "Indicator for whether this model is an ensemble specifically of other models submitted to this Hub", | ||
| "type": "boolean" | ||
| } | ||
| }, | ||
| "additionalProperties": false, | ||
| "required": [ | ||
| "team_name", | ||
| "team_abbr", | ||
| "model_name", | ||
| "model_abbr", | ||
| "model_contributors", | ||
| "license", | ||
| "designated_model", | ||
| "data_inputs", | ||
| "methods", | ||
| "methods_long", | ||
| "ensemble_of_models", | ||
| "ensemble_of_hub_models" | ||
| ] | ||
| } |
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| { | ||
| "schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.1/tasks-schema.json", | ||
| "rounds": [{ | ||
| "round_id_from_variable": true, | ||
| "round_id": "origin_date", | ||
| "model_tasks": [{ | ||
| "task_ids": { | ||
| "origin_date": { | ||
| "required": null, | ||
| "optional": [ | ||
| "2024-04-30", "2024-05-31", "2024-06-30", | ||
| "2024-07-31", "2024-08-31", "2024-09-30" | ||
| ] | ||
| }, | ||
| "target_date": { | ||
| "required": null, | ||
| "optional": [ | ||
| "2024-05-31", "2024-06-30", "2024-07-31", | ||
| "2024-08-31", "2024-09-30", "2024-10-31" | ||
| ] | ||
| }, | ||
| "target": { | ||
| "required": ["WNV cases"], | ||
| "optional": null | ||
| }, | ||
| "location": { | ||
| "required": [ | ||
| "Fresno", "Kern", "Los Angeles", "Merced", | ||
| "Orange", "Placer", "Riverside", "Sacramento", | ||
| "San Bernardino", "San Joaquin", "Solano", | ||
| "Stanislaus", "Tulare" | ||
| ], | ||
| "optional": null | ||
| } | ||
| }, | ||
| "output_type": { | ||
| "cdf": { | ||
| "output_type_id": { | ||
| "required": [0, 1, 2, 3, 4, 5, 6, 8, 10, 15, 200], | ||
| "optional": null | ||
| }, | ||
| "value": { | ||
| "type": "double", | ||
| "minimum": 0, | ||
| "maximum": 1 | ||
| } | ||
| } | ||
| }, | ||
| "target_metadata": [{ | ||
| "target_id": "WNV cases", | ||
| "target_name": "Monthly reported WNV cases aggregated at a county level.", | ||
| "target_units": "count", | ||
| "target_keys": {"target": ["WNV cases"]}, | ||
| "target_type": "discrete", | ||
| "description": "Monthly reported WNV cases (including mild, fever, and neuro) aggregated at a county level for selected counties in California (per million county inhabitants).", | ||
| "time_unit": "month", | ||
| "is_step_ahead": true | ||
| }] | ||
| }], | ||
| "submissions_due": { | ||
| "relative_to": "origin_date", | ||
| "start": -15, | ||
| "end": 8 | ||
| } | ||
| } | ||
| ]} |