Death in Venice: A Digital Reconstruction of a Large Plague Outbreak During 1630-1631

Paper: https://www.medrxiv.org/content/10.1101/2020.03.11.20034116v1.

Contents

• The main dataset: dataset folder.
• Exploratory analysis on main dataset: space_time_exploration notebook.
• Deterministic modeling: models_of_plague_epid notebook.
• Stochastic modeling: epid_simulations notebook.
• Analysis of the Sant'Eufemia parish dataset: Sant_Eufemia folder.

Cite as

Lazzari, G., Colavizza, G., Bortoluzzi, F., Drago, D., Erboso, A., Zugno, F., ... & Salathé, M. (2020). A digital reconstruction of the 1630–1631 large plague outbreak in Venice. Scientific reports, 10(1), 1-7.

or

@article{lazzari2020digital,
  title={A digital reconstruction of the 1630--1631 large plague outbreak in Venice},
  author={Lazzari, Gianrocco and Colavizza, Giovanni and Bortoluzzi, Fabio and Drago, Davide and Erboso, Andrea and Zugno, Francesca and Kaplan, Fr{\'e}d{\'e}ric and Salath{\'e}, Marcel},
  journal={Scientific reports},
  volume={10},
  number={1},
  pages={1--7},
  year={2020},
  publisher={Nature Publishing Group}
}```