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Clarify --sample_name input options
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@marithetland
marithetland authored Mar 19, 2021
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6 changes: 4 additions & 2 deletions README.md
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Expand Up @@ -25,10 +25,12 @@ Where:
* `--sample_names`: A CSV-file which connects barcodes with sample names, following the format:
```
barcode,sample_name
NB01,NEGCONTROL
NB02,E1234567_P1
barcode01,NEGCONTROL
barcode02,E1234567_P1
NB03,V2345678_P1
```
The barcode column can take values following the format barcode[0-9][0-9] or NB[0-9][0-9] (as in the example above), and the sample_name column can be anything you'd like.


Note: Basecalling and demultiplexing may also be performed if not already done on GridION/MinIT.

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