Fix docker user issues

nf-core · Jul 8, 2024 · bd83a34 · bd83a34
1 parent b1bb8f0
commit bd83a34
Show file tree

Hide file tree

Showing 4 changed files with 11 additions and 5 deletions.
diff --git a/modules/nf-core/fargene/environment.yml b/modules/nf-core/fargene/environment.yml
diff --git a/modules/nf-core/fargene/main.nf b/modules/nf-core/fargene/main.nf
diff --git a/modules/nf-core/fargene/meta.yml b/modules/nf-core/fargene/meta.yml
diff --git a/nextflow.config b/nextflow.config
@@ -269,6 +269,7 @@ profiles {
         shifter.enabled        = false
         charliecloud.enabled   = false
         apptainer.enabled      = false
+        docker.runOptions       = '-u $(id -u):$(id -g)'
     }
     arm {
         docker.runOptions = '-u $(id -u):$(id -g) --platform=linux/amd64'