Repositories list

• scribl

  Public
  Semantic Capture of Relationships In Biological Literature (scribl)

  systems-biologycomputational-biologynetwork-biology+ 1literature-mining

  Python

  •

  GNU Affero General Public License v3.0

  •1•2•0•0•Updated Jan 14, 2025Jan 14, 2025

• nutch

  Public
  OPeNDAP fork of Apache Nutch: extensible and scalable web crawler: https://github.com/amberbiology/nutch/tree/opendap-crawl

  Java

  •

  Apache License 2.0

  •1.2k•0•0•0•Updated Nov 1, 2024Nov 1, 2024

• opendap_semantics_pipeline

  Public
  Fork of semantics_pipeline for OPeNDAP crawl

  data-scienceearth-scienceearth-science-data

  Python

  •

  Other

  •2•1•0•0•Updated Oct 29, 2024Oct 29, 2024

• opendap-OwsCapable

  Public
  fork of b-cube OwsCapable

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• opendap-semantics-preprocessing

  Public
  fork of initial text preprocessors for the triplestore and feature classification

  Jupyter Notebook

  •

  Other

  •3•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• py4lifesci

  Public
  Code repository for the book "Python for the Life Sciences" by Lancaster & Webster

  bioinformaticsbooksystems-biology+ 4computational-biologynext-generation-sequencingpythonlife-sciences

  Python

  •15•27•0•0•Updated May 26, 2020May 26, 2020

• nutch-crawler

  Public
  Apache Nutch fork tunned for OPeNDAP project

  Java

  •

  Apache License 2.0

  •2•0•0•0•Updated May 18, 2015May 18, 2015