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Code created for the ADACS MAP AMoller_2023A project #45

Merged
merged 60 commits into from
Nov 29, 2023
Merged

Code created for the ADACS MAP AMoller_2023A project #45

merged 60 commits into from
Nov 29, 2023

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gbpoole
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@gbpoole gbpoole commented Nov 29, 2023

Adds optimisations, pytorch2 compatibility and new CI/CD capabilities.

JHu-s and others added 30 commits May 10, 2023 09:29
@JHu-s
modify env file for osx-64
664cf01
@JHu-s
add rnn tests
74832a2
@JHu-s
Merge branch 'master' into tiger_dev
772926f
@JHu-s
fix error due to pandas deprecation
a88ab43
@JHu-s
fix error due to numpy deprecation
de7b5ff
@JHu-s
sorted out error related to packedsequence
1065dc1
@JHu-s
debugging
f5a9ff2
@JHu-s
debugging
e2b0db9
@JHu-s
debugging
c6bd5ee
@JHu-s
working version of BBB
a4536a7
@JHu-s
update usage of lstm functions
30ff8a9
@JHu-s
refactor
c78cfbe
@JHu-s
fix control flow when creating layer param
209d502
@JHu-s
Merge branch 'tiger_dev' into tiger_dev_pytorch2
871fe10
@JHu-s
comment out code block not in use now
bc782a1
@JHu-s
paste the fixer for sntypes from amoller
060a9d5
@JHu-s
change the format of value for option sntypes
35b6203
@gbpoole
Initial shift to poetry pyproject.toml. Untested.
5b67ff3
@gbpoole
Add missing dependencies.
9b6542f
@gbpoole
Adjust torch and torchvision versions; add bump, publish and pull_req…
940aaaa 
…uest workflows.
@gbpoole
Remove test_rf.py tests.
9152956
@gbpoole
Add RTD config file.
686563a
@gbpoole
Turn off PYPI publishing for testing purposes.
bfc59b7
@gbpoole
Fix a broken image link in the README.md
5fe9f47
@gbpoole
Add pre-commit config; disable tests, linting and formatting in workf…
d85ff52 
…lows to allow workflow testing.
@gbpoole
Merge pull request #3 from ADACS-Australia/feature-new_CICD
ea0798a 
Feature new CI/CD
@gbpoole
Downgrade Panda version to avoid AttributeError: 'Series' object has …
20119de 
…no attribute 'append' error.
@gbpoole
Try again to turn tests off for workflow testing.
100f14b
@gbpoole
Merge pull request #4 from ADACS-Australia/feature-new_CICD
bf4cf18 
Downgrade Panda version to avoid AttributeError: 'Series' object has …
@gbpoole
Add colorama to dependencies.
867bcad
gbpoole and others added 29 commits November 27, 2023 21:46
@gbpoole
Merge pull request #5 from ADACS-Australia/feature-new_CICD
090888f 
Add colorama to dependencies.
@gbpoole
Remove old RTD config.
3bbf69b
@gbpoole
Merge pull request #6 from ADACS-Australia/feature-new_CICD
9a4eb60 
Remove old RTD config.
@gbpoole
Fix bug in how RTD build is triggered with curl
e8abb3e
@gbpoole
Merge pull request #7 from ADACS-Australia/feature-new_CICD
e8ee33a 
Fix bug in how RTD build is triggered with curl
@JHu-s
correct test sntypes format
5832222
@gbpoole
Merge branch 'tiger_dev_pytorch2' of github.com:ADACS-Australia/amoll…
f1d1c86 
…er_2023a into feature-new_CICD
@gbpoole
Turn tests back on in the PR workflow, now that they are passing.
57d7360
@gbpoole
Enforce linting standards.
a034154
@gbpoole
Enfore code formatting standards.
949c2ad
@gbpoole
Add Cuda Toolkit to the GitHub Actions setup.
7c52598
@gbpoole
Merge pull request #8 from ADACS-Australia/ADACS_MAP_AMoller_2023A
a3b93a9 
First PR for ADACS MAP project AMoller_2023A
@gbpoole
Add notes for devs to documentation.
d0173a1
@gbpoole
Aff libcudnn8 to pull_request.yml
b323a17
@gbpoole
Merge pull request #10 from ADACS-Australia/gbpoole-patch-1
1a45569 
Aff libcudnn8 to pull_request.yml
@gbpoole
Add libcudnn to workflow Cuda setup.
85412da
@gbpoole
Merge pull request #11 from ADACS-Australia/ADACS_MAP_AMoller_2023A
cd76652 
Add notes for devs and debug workflow Cuda setup
@gbpoole
Debugging workflow cuda setup.
845cb6a
@gbpoole
Downgrade torch to deal with metadata error.
d0d6da7
@gbpoole
Merge pull request #12 from ADACS-Australia/ADACS_MAP_AMoller_2023A
fa5537e 
Debugging workflow cuda setup.
@gbpoole
Various documentation bug fixes.
721cbb7
@gbpoole
Turn off workflow publishing logic if secrets are not defined.
a07b4a4
@gbpoole
Add a comment about the use of env variables in publishing workflow.
94dfaaf
@gbpoole
Merge pull request #13 from ADACS-Australia/ADACS_MAP_AMoller_2023A
eaf1f1b 
Various documentation bug fixes
@gbpoole
Merge pull request #14 from ADACS-Australia/ADACS_MAP_AMoller_2023A
ac48fc1 
Turn off workflow publishing logic if secrets are not defined
@gbpoole
Update notes_for_developers content about documentation.
6e5cd78
@gbpoole
Documentation debugging.
d2f6f22
@gbpoole
Merge pull request #15 from ADACS-Australia/ADACS_MAP_AMoller_2023A
bbbeaa7 
Finish documentation changes
@JHu-s
Merge remote-tracking branch 'upstream/main' into main
7d6662d
@anaismoller anaismoller merged commit 84d7890 into supernnova:main Nov 29, 2023
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3 participants
@gbpoole @anaismoller @JHu-s