Merge pull request #363 from tdwg/taxonIDReference

Remove taxonIDReference, relax requirements for taxonID
tdwg · Nov 2, 2023 · 3828277 · 3828277
2 parents ebf585d + 6c246d3
commit 3828277
Show file tree

Hide file tree

Showing 4 changed files with 566 additions and 594 deletions.
diff --git a/camtrap-dp-profile.json b/camtrap-dp-profile.json
@@ -283,29 +283,21 @@
           "items": {
             "type": "object",
             "required": [
-              "taxonID",
-              "taxonIDReference",
               "scientificName"
             ],
             "properties": {
-              "taxonID": {
-                "description": "Unique identifier of the taxon according to the taxonomic reference list defined by `taxonIDReference`.",
-                "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/taxonID",
-                "type": "string",
-                "example": "QLXL"
-              },
-              "taxonIDReference": {
-                "description": "URL of the source (reference list) of the `taxonID`.",
-                "type": "string",
-                "format": "uri",
-                "example": "https://www.catalogueoflife.org"
-              },
               "scientificName": {
                 "description": "Scientific name of the taxon.",
                 "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/scientificName",
                 "type": "string",
                 "example": "Canis lupus"
               },
+              "taxonID": {
+                "description": "Unique identifier of the taxon. Preferably a global unique identifier issued by an authoritative checklist.",
+                "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/taxonID",
+                "type": "string",
+                "example": "https://www.checklistbank.org/dataset/COL2023/taxon/QLXL"
+              },
               "taxonRank": {
                 "description": "Taxonomic rank of the scientific name.",
                 "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/taxonRank",

diff --git a/example/datapackage.json b/example/datapackage.json
@@ -172,99 +172,89 @@
   },
   "taxonomic": [
     {
-      "taxonID": "DGP6",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Anas platyrhynchos",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/DGP6",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "mallard",
         "nld": "wilde eend"
       }
     },
     {
-      "taxonID": "DGPL",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Anas strepera",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/DGPL",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "gadwall",
         "nld": "krakeend"
       }
     },
     {
-      "taxonID": "32FH",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Ardea",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/32FH",
       "taxonRank": "genus",
       "vernacularNames": {
         "eng": "great herons",
         "nld": "reigers"
       }
     },
     {
-      "taxonID": "GCHS",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Ardea cinerea",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/GCHS",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "grey heron",
         "nld": "blauwe reiger"
       }
     },
     {
-      "taxonID": "V2",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Aves",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/V2",
       "taxonRank": "class",
       "vernacularNames": {
         "eng": "bird sp.",
         "nld": "vogel"
       }
     },
     {
-      "taxonID": "6MB3T",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Homo sapiens",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/6MB3T",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "human",
         "nld": "mens"
       }
     },
     {
-      "taxonID": "3Y9VW",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Martes foina",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/3Y9VW",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "beech marten",
         "nld": "steenmarter"
       }
     },
     {
-      "taxonID": "44QYC",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Mustela putorius",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/44QYC",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "European polecat",
         "nld": "bunzing"
       }
     },
     {
-      "taxonID": "4RM67",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Rattus norvegicus",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/4RM67",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "brown rat",
         "nld": "bruine rat"
       }
     },
     {
-      "taxonID": "5BSG3",
-      "taxonIDReference": "https://www.checklistbank.org/dataset/COL2023",
       "scientificName": "Vulpes vulpes",
+      "taxonID": "https://www.checklistbank.org/dataset/COL2023/taxon/5BSG3",
       "taxonRank": "species",
       "vernacularNames": {
         "eng": "red fox",