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minor-allele-frequency

Here are 3 public repositories matching this topic...

tbrunetti / GP3

GWAS Pre-Processing Pipeline

quality-control gwas linkage-disequilibrium pca quality-assurance quality-metrics 1000genomes gwas-pipeline hardy-weinberg-equilibrium heterozygosity minor-allele-frequency identity-by-descent

Updated Nov 6, 2019
Python

SNPio

btmartin721 / SNPio

API to read, write, and filter DNA sequence alignment files

snps plots file-converter missing-data filtering principal-component-analysis structure-alignment phylip input-output vcf-files genotypes minor-allele-frequency dna-sequence-alignment

Updated Jan 7, 2025
Python

hannesgislason / wg-project

Bioinformatic R/Rmd-code for scientific paper published in BMC Genomics

ancestry inbreeding genomes relatedness heterozygosity minor-allele-frequency runs-of-homozygosity bottleneck-effect timing-of-founder-event

Updated Nov 28, 2023
R

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