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transcript-reconstruction

Here are 2 public repositories matching this topic...

bambu

GoekeLab / bambu

Reference-guided transcript discovery and quantification for long read RNA-Seq data

rna-seq r nanopore bioconductor transcriptomics rna-seq-analysis transcript-quantification bambu long-reads nanopore-sequencing transcript-reconstruction

Updated Jan 9, 2025
R

aljpetri / isONform

De novo construction of isoforms from long-read data

transcriptomics oxford-nanopore bioinformatics-tool reference-free pacbio-iso-seq transcript-reconstruction annotation-free

Updated Nov 26, 2024
Python

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