TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)
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Oct 9, 2019 - C
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neighbor-joining
Here are 8 public repositories matching this topic...
Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree
workflow phylogenetics phylogeography neighbor-joining raxml sliding-windows fasttree robinson-foulds
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Apr 13, 2023 - Python
Rapid Neighbor-Joining phylogenetic tree creation method implementation for Node.js
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Jul 22, 2016 - JavaScript
GPU accllerated program for Neighbor-Joining algorithm of Biopython library with PyCUDA
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Oct 1, 2019 - Python
For Species Tree estimation using similarity matrix, distance matrix and NJ (FastME)
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Sep 16, 2021 - Python
Nei-Saitou neighbor-joining algorithm for phylogeny construction/inference. Neighbor joining is a bottom-up (agglomerative) clustering method for the creation of phylogenetic/evolutionary trees.
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Nov 7, 2019 - Python
Python tool for relative mutation rate of different genes across viral strains.
flask-application gene-annotation neighbor-joining viral-genomics multiple-sequence-alignment github-codespaces mutation-rates
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May 11, 2024 - Python
Web App for constructing phylogenetic trees using various clustering methods and algorithms.
phylogenetic-trees phylogenetics evolutionary-algorithms neighbor-joining upgma-clustering distance-matrix maximum-parsimony clustering-trees
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Dec 5, 2024 - HTML
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